Vitamin B12 Deficiency on Long-Term Metformin and Proton Pump Inhibitors: A Case for Scheduled Testing
DOI:
https://doi.org/10.5281/zenodo.22278558Keywords:
Vitamin B12, Metformin, Proton pump inhibitors, Monitoring, PolypharmacyAbstract
The two drugs named in the title do not carry equal evidence. Metformin is established: it reduces serum B12 in 10 to 30 per cent
of users, a regulator has reclassified low B12 as a common side effect affecting up to one in ten, and in a study of 231 matched
pairs deficiency was present in 22.5 against 7.4 per cent, persisting at 17.9 against 5.6 per cent after acid-suppressant users were
excluded. For proton pump inhibitors the evidence conflicts: one systematic review found no difference in serum B12 between
users and controls, with a standardised mean difference of 0.01 (p = 0.92), while an earlier meta-analysis of acid-lowering drugs
reported a hazard ratio of 1.83 using inconsistent deficiency criteria. Testing meanwhile is uncommon: in 104 patients taking both
agents, 13.5 per cent had a documented level and none was deficient.
References
Concomitant use investigators. "Vitamin B12 deficiency associated with concomitant metformin and proton pump inhibitor use". Diabetes Care 35(2012):e104.
Bailey CJ, Turner RC. "Metformin". N Engl J Med 334(1996):574-579.
Geriatric polypharmacy review authors. "Risk of vitamin B12 deficiency associated with proton pump inhibitors, metformin, and H2 blockers in geriatric patients: a polypharmacy perspective". Egypt J Intern Med 37(2025):516.
Green R, Allen LH, Bjorke-Monsen AL, Brito A, Gueant JL, Miller JW, et al. "Vitamin B12 deficiency". Nat Rev Dis Primers 3(2017):17040.
Polypharmacy systematic review authors. "A systematic review of long-term use of proton pump inhibitors (PPIs) in older adults on polypharmacy: do PPIs deplete nutrients?". Nutrients 17(2025):3021.
Primary care survey authors. "Clinician awareness and implementation of vitamin B12 monitoring guidance in metformin users: a primary care survey". BJGP Open (2025).
Cross-sectional investigators. "Prevalence of vitamin B12 deficiency in type 2 diabetic patients using metformin: a cross-sectional study". Sao Paulo Med J 142(2024):e2023374.
PPI meta-analysis authors. "Association between long-term proton pump inhibitor therapy and vitamin B12 status: a systematic review and meta-analysis". Cureus 17(2025):e89127.
Quality improvement investigators. "Analysis of vitamin B12 levels in metformin and PPI use for quality improvement". Medtigo J Med 4(2026):1-8.
Monitoring audit investigators. "Evaluation of vitamin B12 monitoring in patients on concomitant metformin and proton pump inhibitors". Innov Pharm 12(2021):10.
American Diabetes Association Professional Practice Committee. "Pharmacologic approaches to glycemic treatment: standards of care in diabetes". Diabetes Care 46(2023):S140-S157.
Aroda VR, Edelstein SL, Goldberg RB, Knowler WC, Marcovina SM, Orchard TJ, et al. "Long-term metformin use and vitamin B12 deficiency in the Diabetes Prevention Program Outcomes Study". J Clin Endocrinol Metab 101(2016):1754-1761.
de Jager J, Kooy A, Lehert P, Wulffele MG, van der Kolk J, Bets D, et al. "Long term treatment with metformin in patients with type 2 diabetes and risk of vitamin B-12 deficiency: randomised placebo controlled trial". BMJ 340(2010):c2181.
Ting RZW, Szeto CC, Chan MHM, Ma KK, Chow KM. "Risk factors of vitamin B12 deficiency in patients receiving metformin". Arch Intern Med 166(2006):1975-1979.
Reinstatler L, Qi YP, Williamson RS, Garn JV, Oakley GP. "Association of biochemical B12 deficiency with metformin therapy and vitamin B12 supplements". Diabetes Care 35(2012):327-333.
Chapman LE, Darling AL, Brown JE. "Association between metformin and vitamin B12 deficiency in patients with type 2 diabetes: a systematic review and meta-analysis". Diabetes Metab 42(2016):316-327.
Liu Q, Li S, Quan H, Li J. "Vitamin B12 status in metformin treated patients: systematic review". PLoS One 9(2014):e100379.
Kim J, Ahn CW, Fang S, Lee HS, Park JS. "Association between metformin dose and vitamin B12 deficiency in patients with type 2 diabetes". Medicine 98(2019):e17918.
Out M, Kooy A, Lehert P, Schalkwijk CA, Stehouwer CDA. "Long-term treatment with metformin in type 2 diabetes and methylmalonic acid: post hoc analysis of a randomized controlled 4.3year trial". J Diabetes Complications 32(2018):171-178.
Medicines and Healthcare products Regulatory Agency. "Metformin and reduced vitamin B12 levels: new advice for monitoring patients at risk". Drug Safety Update 15(2022):1.
Lam JR, Schneider JL, Zhao W, Corley DA. "Proton pump inhibitor and histamine 2 receptor antagonist use and vitamin B12 deficiency". JAMA 310(2013):2435-2442.
Jung SB, Nagaraja V, Kapur A, Eslick GD. "Association between vitamin B12 deficiency and long-term use of acid-lowering agents: a systematic review and meta-analysis". Intern Med J 45(2015):409-416.
Valuck RJ, Ruscin JM. "A case-control study on adverse effects: H2 blocker or proton pump inhibitor use and risk of vitamin B12 deficiency in older adults". J Clin Epidemiol 57(2004):422-428.
Den Elzen WPJ, Groeneveld Y, de Ruijter W, Souverijn JHM, le Cessie S, Assendelft WJJ, et al. "Long-term use of proton pump inhibitors and vitamin B12 status in elderly individuals". Aliment Pharmacol Ther 27(2008):491-497.
Freedberg DE, Kim LS, Yang YX. "The risks and benefits of long-term use of proton pump inhibitors: expert review and best practice advice from the American Gastroenterological Association". Gastroenterology 152(2017):706-715.
Heidelbaugh JJ. "Proton pump inhibitors and risk of vitamin and mineral deficiency: evidence and clinical implications". Ther Adv Drug Saf 4(2013):125-133.
Carabotti M, Annibale B, Lahner E. "Common pitfalls in the management of patients with micronutrient deficiency: keep in mind the stomach". Nutrients 13(2021):208.
Devalia V, Hamilton MS, Molloy AM. "Guidelines for the diagnosis and treatment of cobalamin and folate disorders". Br J Haematol 166(2014):496-513.
Hunt A, Harrington D, Robinson S. "Vitamin B12 deficiency". BMJ 349(2014):g5226.
Wolffenbuttel BHR, Wouters HJCM, Heiner-Fokkema MR, van der Klauw MM. "The many faces of cobalamin (vitamin B12) deficiency". Mayo Clin Proc Innov Qual Outcomes 3(2019):200-214.
Langan RC, Goodbred AJ. "Vitamin B12 deficiency: recognition and management". Am Fam Physician 96(2017):384-389.
Stabler SP. "Vitamin B12 deficiency". N Engl J Med 368(2013):149-160.
Yang W, Cai X, Wu H, Ji L. "Associations between metformin use and vitamin B12 levels, anemia, and neuropathy in patients with diabetes: a meta-analysis". J Diabetes 11(2019):729-743.
Infante M, Leoni M, Caprio M, Fabbri A. "Long-term metformin therapy and vitamin B12 deficiency: an association to bear in mind". World J Diabetes 12(2021):916-931.

